Python code references

A module for building objects from configuration files.

class quilt.builder.MultiscaleNetwork(spiking_network: SpikingNetwork, oscillator_network: OscillatorNetwork, transducers: str | list)[source]

Bases: object

build()[source]

property dt: Shorthand for EEGcap compatibility

initialize(tau, vmin, vmax)[source]

property n_oscillators

property n_populations

property n_timesteps_initialization

property n_transducers

property oscillators: Shorthand for EEGcap compatibility

run(time)[source]

set_evolution_contextes(dt_short=0.1, dt_long=1.0)[source]

set_multiscale_projections(file=None, T2O_coupling=None, O2T_coupling=None, T2O=None, O2T=None)[source]

property tau_init: Shorthand for EEGcap compatibility

property transducer_histories

transducer_id(td_name)[source]

class quilt.builder.NeuronCatalogue[source]

Bases: object

classmethod from_yaml(yaml_file)[source]

update(neuron_model, attribute, value)[source]

class quilt.builder.OscillatorNetwork[source]

Bases: object

build()[source]

classmethod homogeneous_from_TVB(connectivity_file, oscillator_parameters, global_weight=1.0, conduction_speed=1.0)[source]

initialize(tau, vmin, vmax, dt=1.0)[source]

reg_id(reg_name)[source]

run(time=1)[source]

property tau_init

class quilt.builder.ParametricSpikingNetwork[source]

Bases: SpikingNetwork

classmethod from_dict(susceptibility_dict, network=None, network_file=None, neuron_file=None)[source]

classmethod from_yaml(network_file, neuron_file, susceptibility_files)[source]

set_parameters(**params)[source]

class quilt.builder.SpikingNetwork[source]

Bases: object

build(progress_bar=False)[source]

classmethod from_yaml(features_file, neuron_file)[source]

get_firing_rates(delta_ms=1, sliding=True)[source]

property interface

monitorize_spikes(populations=None)[source]

monitorize_states(populations=None)[source]

property n_populations

pop_id(pop_name)[source]

refresh_all()[source]

run(dt=0.1, time=1)[source]